MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,726
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,795
Total number of protein coding genes annotated/found:
2,726
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 137 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5041|JADGLJ010000007.1
SEQF5041_02440
Genome Viewer
NA
AA
678/226
51-728
hypothetical protein
SEQF5041|JADGLJ010000010.1
SEQF5041_00001
Genome Viewer
NA
AA
1704/568
86-1789
putative licABCH operon regulator
SEQF5041|JADGLJ010000023.1
SEQF5041_00698
Genome Viewer
NA
AA
180/60
91-270
DNA gyrase subunit B
SEQF5041|JADGLJ010000002.1
SEQF5041_00701
Genome Viewer
NA
AA
3552/1184
107-3658
hypothetical protein
SEQF5041|JADGLJ010000005.1
SEQF5041_01955
Genome Viewer
NA
AA
222/74
225-4
hypothetical protein
SEQF5041|JADGLJ010000016.1
SEQF5041_00130
Genome Viewer
NA
AA
141/47
242-382
hypothetical protein
SEQF5041|JADGLJ010000006.1
SEQF5041_02274
Genome Viewer
NA
AA
504/168
270-773
Putative universal stress protein
SEQF5041|JADGLJ010000016.1
SEQF5041_00131
Genome Viewer
NA
AA
591/197
440-1030
hypothetical protein
SEQF5041|JADGLJ010000005.1
SEQF5041_01956
Genome Viewer
NA
AA
501/167
725-225
PTS system glucose-specific EIIA component
SEQF5041|JADGLJ010000004.1
SEQF5041_01622
Genome Viewer
NA
AA
798/266
946-149
3-oxoacyl-[acyl-carrier-protein] reductase FabG
SEQF5041|JADGLJ010000006.1
SEQF5041_02275
Genome Viewer
NA
AA
1179/393
1012-2190
hypothetical protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02696
Genome Viewer
NA
AA
111/37
1039-1149
hypothetical protein
SEQF5041|JADGLJ010000005.1
SEQF5041_01957
Genome Viewer
NA
AA
429/143
1168-740
Peptide methionine sulfoxide reductase MsrB
SEQF5041|JADGLJ010000009.1
SEQF5041_02697
Genome Viewer
NA
AA
906/302
1169-2074
Arginase
SEQF5041|JADGLJ010000007.1
SEQF5041_02441
Genome Viewer
NA
AA
843/281
1179-2021
Transcription antiterminator LicT
SEQF5041|JADGLJ010000001.1
SEQF5041_00132
Genome Viewer
NA
AA
1065/355
1613-549
Iron-sulfur cluster carrier protein
SEQF5041|JADGLJ010000005.1
SEQF5041_01958
Genome Viewer
NA
AA
528/176
1688-1161
Peptide methionine sulfoxide reductase MsrA 2
SEQF5041|JADGLJ010000003.1
SEQF5041_01243
Genome Viewer
NA
AA
423/141
1744-1322
Acetyltransferase
SEQF5041|JADGLJ010000010.1
SEQF5041_00002
Genome Viewer
NA
AA
471/157
1792-2262
hypothetical protein
SEQF5041|JADGLJ010000007.1
SEQF5041_02442
Genome Viewer
NA
AA
1875/625
2199-4073
PTS system beta-glucoside-specific EIIBCA component
Items 1 - 20
🡆
click arrow to navigate by page or
of 137 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by